STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO42F-box protein 42. (362 aa)    
Predicted Functional Partners:
CUL1
Cullin-1 isoform X1.
    
 
 0.588
FBXO42-2
LOW QUALITY PROTEIN: F-box only protein 42.
 
     0.569
DRG1
Developmentally-regulated GTP-binding protein 1.
    
   0.487
SRP19
Signal recognition particle 19 kDa protein.
     
 0.486
POLE2
DNA polymerase epsilon subunit 2.
    
   0.459
SLC25A1
Solute carrier family 25 (mitochondrial citrate transporter), member 1.
    
   0.459
CUNH15orf40
UPF0235 protein C15orf40 homolog.
    
   0.459
GRN
Granulin precursor.
    
   0.459
CXorf56
UPF0428 protein CXorf56 homolog.
    
   0.459
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.419
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.