Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZER1Zyg-11 protein homolog. (766 aa)    
Predicted Functional Partners:
CUL2
Cullin 2.
    
 0.827
ELOC
Elongin-C.
    
 
 0.811
ENSSCAP00000022102
Von Hippel-Lindau disease tumor suppressor-like.
   
 
 0.789
PPTC7
Protein phosphatase PTC7 homolog.
      
 0.692
ZYG11A
Protein zyg-11 homolog B.
     
0.644
FPGS
Folylpolyglutamate synthase, mitochondrial.
      
 0.614
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.612
LRR1
Leucine-rich repeat protein 1.
      
 0.609
UBR4
E3 ubiquitin-protein ligase UBR4.
      
 0.594
APPBP2
Amyloid protein-binding protein 2.
     
 0.584
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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