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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZER1Zyg-11 protein homolog. (766 aa)    
Predicted Functional Partners:
ZYG11A
Protein zyg-11 homolog B.
     
0.960
ENSSCAP00000022102
Von Hippel-Lindau disease tumor suppressor-like.
   
 
 0.908
ELOC
Elongin-C.
    
 0.890
RBX1
E3 ubiquitin-protein ligase RBX1.
     
 0.869
ARIH1
E3 ubiquitin-protein ligase ARIH1.
   
 0.826
CUL2
Cullin 2.
    
 0.822
FEM1B
Protein fem-1 homolog B.
     
 0.821
KLHDC10
Kelch domain-containing protein 10.
   
 
 0.820
KLHDC3
Kelch domain-containing protein 3.
     
 0.820
APPBP2
Amyloid protein-binding protein 2.
     
 0.817
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.