STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR41WD repeat-containing protein 41. (459 aa)    
Predicted Functional Partners:
SMCR8
Guanine nucleotide exchange protein SMCR8 isoform X1.
    
 0.995
C9orf72
Guanine nucleotide exchange C9orf72 homolog.
    
 0.993
RAB39B
Ras-related protein Rab-39B.
    
 0.918
RAB8A
Ras-related protein Rab-8A.
     
 0.915
LOC103822551
Ras-related protein Rab-39B-like.
     
  0.900
CDC20
Cell division cycle 20, cofactor of APC complex.
   
 0.870
FZR1
Cell division cycle 20-like protein 1, cofactor of APC complex.
   
 0.870
CCNA2
Cyclin-A2.
   
 0.850
CCNA1
Cyclin-A1.
   
 0.850
CDC25A
M-phase inducer phosphatase 1 isoform X1.
   
 0.841
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.