STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C16orf70UPF0183 protein C16orf70 homolog isoform X1. (401 aa)    
Predicted Functional Partners:
BCAS3
Breast carcinoma-amplified sequence 3 isoform X1.
   
 
 0.959
WIPI2
WD repeat domain phosphoinositide-interacting protein 2 isoform X2.
    
 
 0.770
WIPI1
WD repeat domain phosphoinositide-interacting protein 1.
    
 
 0.705
ZFYVE1
Zinc finger FYVE domain-containing protein 1.
   
  
 0.672
POMP
Proteasome maturation protein.
    
   0.650
JMY
LOW QUALITY PROTEIN: junction-mediating and -regulatory protein.
      
 0.594
APPL1
DCC-interacting protein 13-alpha isoform X1.
    
   0.573
APPL2
DCC-interacting protein 13-beta isoform X1.
    
   0.573
XYLB
Xylulose kinase isoform X1.
      
 0.570
PSMG2
Proteasome assembly chaperone 2.
    
   0.550
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.