STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP120Centrosomal protein of 120 kDa isoform X1. (1024 aa)    
Predicted Functional Partners:
NUDC
Nuclear migration protein nudC.
     
 0.713
SUN2
SUN domain-containing protein 1/2.
    
 0.705
SUN1
SUN domain-containing protein 1 isoform X1.
    
 0.705
SPICE1
Spindle and centriole-associated protein 1 isoform X1.
    
 
 0.701
SYNE2
Nesprin-2.
    
 0.677
HOOK3
Hook microtubule tethering protein 3.
    
 0.664
PLK4
Serine/threonine-protein kinase PLK4.
    
 0.589
SAXO2
Stabilizer of axonemal microtubules 2.
   
 0.585
CEP290
Centrosomal protein 290.
   
 0.573
KIAA0586
Protein TALPID3 isoform X1.
    
 0.570
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.