STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA5L1Spermatogenesis-associated protein 5-like protein 1. (759 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
   
 0.999
UFD1
Ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1.
    
 0.879
DERL1
Derlin-1.
   
 0.876
YOD1
Ubiquitin thioesterase OTU1.
   
 0.848
ERLEC1
Endoplasmic reticulum lectin 1 isoform X1.
    
 0.848
ENSSCAP00000002785
annotation not available
   
 0.833
ATXN3
Ataxin-3.
   
 0.831
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 0.788
FAAP100
Fanconi anemia core complex-associated protein 100 isoform X1.
   
 0.776
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
   
 0.776
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.