STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFDP1Craniofacial development protein 1. (263 aa)    
Predicted Functional Partners:
DMAP1
DNA methyltransferase 1-associated protein 1.
   
 0.986
RUVBL1
RuvB-like protein 1 (pontin 52).
   
 0.986
EP400
E1A binding protein p400.
    
 0.977
RUVBL2
RuvB-like protein 2.
    
 0.973
YEATS4
YEATS domain-containing protein 4.
   
 0.964
ENSSCAP00000008823
annotation not available
   
 0.957
ACTR6
Actin-related protein 6.
   
 0.929
ZNHIT1
Zinc finger HIT domain-containing protein 1.
    
 0.917
ACTL6A
Actin-like protein 6A.
    
 0.904
H2AZ1
Histone H2A.Z isoform X1.
    
 0.883
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.