STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000006894annotation not available (116 aa)    
Predicted Functional Partners:
LOC103824012
LOW QUALITY PROTEIN: CUGBP Elav-like family member 3-A.
 
      0.879
ENSSCAP00000022986
CUGBP Elav-like family member 4 isoform X1.
 
      0.838
CELF5
CUGBP Elav-like family member 5 isoform X1.
 
      0.835
ENSSCAP00000022991
CUGBP Elav-like family member 4.
 
      0.808
RBFOX3
RNA binding fox-1 homolog 3.
  
  
 0.543
TRA2A
Transformer-2 protein homolog alpha isoform X1.
  
   
 0.492
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
  
     0.477
ENSSCAP00000022983
annotation not available
 
    
 0.468
BOLL
Protein boule-like.
  
     0.466
ZCRB1
Zinc finger CCHC-type and RNA-binding motif-containing protein 1.
  
     0.463
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.