Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM156Transmembrane protein 156 isoform X1. (314 aa)    
Predicted Functional Partners:
LIAS
Lipoyl synthase, mitochondrial.
      
 0.612
PDS5A
Sister chromatid cohesion protein PDS5 homolog A isoform X1.
      
 0.609
UBE2K
Ubiquitin-conjugating enzyme (huntingtin interacting protein 2).
      
 0.595
RFC1
Replication factor C subunit 1.
      
 0.593
SMIM14
Small integral membrane protein 14.
      
 0.592
RPL9
Large subunit ribosomal protein L9e.
      
 0.578
RBM47
RNA-binding protein 47 isoform X1.
      
 0.569
LRRC66
Leucine rich repeat containing 66.
  
   
 0.561
KLHL5
Kelch-like protein 5 isoform X2.
   
  
 0.536
WDR19
WD repeat-containing protein 19.
      
 0.534
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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