STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL27ALarge subunit ribosomal protein L27Ae. (148 aa)    
Predicted Functional Partners:
ENSSCAP00000002922
annotation not available
   
 0.999
RPLP1
Large subunit ribosomal protein LP1.
 
 
 0.990
RPL5
Ribosomal protein L5.
  
 0.988
RPL14
Large subunit ribosomal protein L14e.
  
 0.987
RPL21
Large subunit ribosomal protein L21e.
   
 0.987
RPL13
Large subunit ribosomal protein L13e.
   
 0.987
RPL23A
Large subunit ribosomal protein L23Ae.
  
 0.986
RPL30
Large subunit ribosomal protein L30e.
   
 0.984
RPLP0
Large subunit ribosomal protein LP0.
  
 0.984
RPL8
Ribosomal protein L8.
  
 0.984
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.