STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNRC6BTrinucleotide repeat-containing gene 6B protein isoform X2. (1758 aa)    
Predicted Functional Partners:
AGO2
Eukaryotic translation initiation factor 2C.
    
 0.903
DICER1
Endoribonuclease Dicer.
    
 0.704
DDX6
Probable ATP-dependent RNA helicase DDX6.
   
 0.514
ADSL
Adenylosuccinate lyase.
 
      0.492
AGO3
Eukaryotic translation initiation factor 2C.
    
 0.465
LOC103822597
Eukaryotic translation initiation factor 2C.
    
 0.465
ENSSCAP00000021417
annotation not available
    
 0.465
ENSSCAP00000021419
Eukaryotic translation initiation factor 2C.
    
 0.465
ENSSCAP00000021422
annotation not available
    
 0.465
DHX9
ATP-dependent RNA helicase A isoform X1.
    
 0.450
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.