Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PADI2Protein-arginine deiminase type-2. (610 aa)    
Predicted Functional Partners:
ENSSCAP00000007009
annotation not available
  
  
 
0.903
LOC103820980
Protein-arginine deiminase type-1-like isoform X1.
  
  
 
0.903
TMEM64
Transmembrane protein 64.
      
 0.660
FAM20A
Pseudokinase FAM20A.
      
 0.575
MMP24
Matrix metalloproteinase-24 (membrane-inserted).
   
  
 0.543
COMT
Catechol O-methyltransferase isoform X2.
      
 0.529
KIAA0100
Protein KIAA0100 homolog isoform X1.
      
 0.528
POFUT2
GDP-fucose protein O-fucosyltransferase 2.
      
 0.528
RSL24D1
Probable ribosome biogenesis protein RLP24.
    
 
 0.492
ENSSCAP00000004937
Leucine-rich repeat-containing protein 14.
      
 0.437
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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