STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACSSacsin. (4604 aa)    
Predicted Functional Partners:
AURKA
Aurora kinase A.
   
 0.750
DIABLO
Diablo homolog, mitochondrial isoform X1.
    
 0.696
APAF1
Apoptotic protease-activating factor 1 isoform X1.
   
 0.695
UBE2V1
LOW QUALITY PROTEIN: ubiquitin-conjugating enzyme E2 variant 1.
    
 0.634
RNF216
E3 ubiquitin-protein ligase RNF216.
    
 0.630
LOC103827059
LOW QUALITY PROTEIN: inner centromere protein-like.
   
 0.618
LOC103827060
Inner centromere protein-like.
   
 0.618
ATP5F1B
F-type H+-transporting ATPase subunit beta.
   
 0.600
CDCA8
Borealin.
   
 0.600
OTUD4
OTU domain-containing protein 4-like.
     
 0.585
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.