Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SUSD2Sushi domain-containing protein 2. (668 aa)    
Predicted Functional Partners:
SUSD1
Sushi domain containing 1.
     
 0.573
SUSD1-2
Sushi domain-containing protein 1.
     
 0.573
LOC103818000
Glutathione S-transferase theta-1.
      
 0.537
UPB1
Beta-ureidopropionase.
      
 0.537
GUCD1
Guanylyl cyclase domain containing 1.
      
 0.535
AFG1L
AFG1-like ATPase isoform X1.
      
 0.530
TACSTD2
Tumor-associated calcium signal transducer 2.
      
 0.528
TSR1
Pre-rRNA-processing protein TSR1 homolog.
      
 0.519
GPR183
Epstein-Barr virus induced gene 2.
      
 0.510
GPNMB
Transmembrane glycoprotein NMB.
      
 0.495
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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