STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMP1Bone morphogenetic protein 1. (993 aa)    
Predicted Functional Partners:
IGSF21
Immunoglobulin superfamily member 21.
      
 0.779
HDAC8
Histone deacetylase 8 isoform X3.
   
  
 0.688
CHRD
Chordin isoform X1.
   
 
 0.682
LDLRAP1
Low density lipoprotein receptor adaptor protein 1.
      
 0.610
LMNA
Lamin A/C.
      
 0.596
PCOLCE2
Procollagen C-endopeptidase enhancer 2 isoform X1.
   
0.552
ALX1
Cartilage homeoprotein 1.
      
 0.539
BMP2
Bone morphogenetic protein 2.
    
 
 0.414
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.