STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC28Tetratricopeptide repeat protein 28 isoform X1. (2420 aa)    
Predicted Functional Partners:
BAG3
BAG family molecular chaperone regulator 3.
    
 0.923
LEO1
RNA polymerase-associated protein LEO1 isoform X1.
    
 0.862
TSC1
Tuberous sclerosis 1.
  
 0.775
HSP90AA1
Heat shock protein HSP 90-alpha.
  
 0.775
TRAP1
Heat shock protein 75 kDa, mitochondrial.
  
 0.775
HSP90AB1
Heat shock protein HSP 90-beta isoform X1.
  
 0.775
SKP1
S-phase kinase-associated protein 1.
   
 0.744
WDHD1
WD repeat and HMG-box DNA-binding protein 1.
    
 
 0.671
ENSSCAP00000008857
LOW QUALITY PROTEIN: alanyl-tRNA editing protein Aarsd1-like.
   
 0.628
PTGES3L
Putative protein PTGES3L.
   
 0.628
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.