STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFAND6AN1-type zinc finger protein 6 isoform X1. (215 aa)    
Predicted Functional Partners:
PEX6
LOW QUALITY PROTEIN: peroxisome biogenesis factor 6.
     
 0.761
RABEP1
Rab GTPase-binding effector protein 1.
    
 0.750
UBA52
Ubiquitin-large subunit ribosomal protein L40e.
    
 0.694
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
    
  0.691
PEX1
Peroxisome biogenesis factor 1 isoform X1.
   
 
 0.634
PEX7
Peroxisomal biogenesis factor 7.
     
 0.576
PEX10
Peroxisome biogenesis factor 10.
     
 0.575
PEX12
Peroxisome assembly protein 12.
     
 0.574
PEX14
Peroxisomal membrane protein PEX14.
     
 0.573
PEX5
Peroxisomal biogenesis factor 5.
    
 0.546
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.