STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMTR2Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2. (764 aa)    
Predicted Functional Partners:
SNRPF
Small nuclear ribonucleoprotein F.
    
   0.742
SNRPC
U1 small nuclear ribonucleoprotein C isoform X2.
    
   0.732
SNRPB
Small nuclear ribonucleoprotein-associated proteins B and B.
    
   0.707
SNRPE
Small nuclear ribonucleoprotein E.
    
   0.696
PSME3IP1
PSME3-interacting protein isoform X1.
      
 0.605
RNMT
MRNA cap guanine-N7 methyltransferase.
      
 0.573
RNGTT
MRNA-capping enzyme isoform X1.
   
  
 0.543
RNASET2
Ribonuclease T2 isoform X3.
      
 0.529
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
    
   0.509
COG4
Conserved oligomeric Golgi complex subunit 4 isoform X1.
      
 0.495
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.