Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DSCAML1Down syndrome cell adhesion molecule-like protein 1 isoform X1. (2008 aa)    
Predicted Functional Partners:
NCK2
Cytoplasmic protein NCK2.
    
 0.753
NTN3
Netrin 1.
   
 0.738
NTN1
Netrin 1.
   
 0.738
ENSSCAP00000018719
annotation not available
   
 0.582
NEO1
Neogenin isoform X1.
   
 0.582
NTNG1
Netrin G1.
    
 0.528
IGDCC4
Immunoglobulin superfamily DCC subclass member 4 isoform X2.
   
 0.493
NOVA1
RNA-binding protein Nova-1.
      
 0.458
MPHOSPH6
M-phase phosphoprotein 6, animal type.
      
 0.432
SLIT2
Slit homolog 2 protein isoform X1.
   
 0.429
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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