STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYPLAL1Lysophospholipase-like protein 1. (229 aa)    
Predicted Functional Partners:
SLC35D3
Solute carrier family 35 member D3.
      
 0.686
ABHD13
Abhydrolase domain-containing protein 13.
     
 0.640
CHAF1B
Chromatin assembly factor 1 subunit B.
    
 
 0.629
ZDHHC23
Palmitoyltransferase ZDHHC23 isoform X1.
    
 
 0.617
ENSSCAP00000003175
La-related protein 6-like.
      
 0.614
LARP6
La-related protein 6.
      
 0.614
VSIG10
V-set and immunoglobulin domain containing 10.
      
 0.606
TTC17
Tetratricopeptide repeat protein 17.
      
 0.603
SLC30A8
Solute carrier family 30 (zinc transporter), member 8.
      
 0.599
SLC30A3
Solute carrier family 30 (zinc transporter), member 3.
      
 0.599
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.