Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATP13A1ATPase 13A1. (1186 aa)    
Predicted Functional Partners:
GET1
Tail-anchored protein insertion receptor WRB.
    
 
 0.811
EMC1
ER membrane protein complex subunit 1 isoform X1.
   
 
 0.768
SGTA
Small glutamine-rich tetratricopeptide repeat-containing protein alpha.
   
  
 0.704
SEC63
Translocation protein SEC63 homolog.
   
 
 0.696
SGSM3
Small G protein signaling modulator 3 isoform X1.
      
 0.685
SPCS2
Signal peptidase complex subunit 2.
   
   0.684
PGK1
Phosphoglycerate kinase 1.
    
 
 0.681
EMC2
ER membrane protein complex subunit 2 isoform X1.
   
 
 0.662
MSTO1
Protein misato homolog 1.
      
 0.637
SNX13
Sorting nexin-13 isoform X1.
      
 0.607
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.