STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM33Transmembrane protein 33. (229 aa)    
Predicted Functional Partners:
RTN1
LOW QUALITY PROTEIN: reticulon-1.
   
 
 0.549
RTN4
Reticulon-4 isoform X3.
   
 
 0.549
SEC13
Protein transport protein SEC13.
      
 0.540
NUP133
Nuclear pore complex protein Nup133.
    
 
 0.536
SLC30A9
Solute carrier family 30 (zinc transporter), member 9.
   
  
 0.524
CHORDC1
Cysteine and histidine-rich domain-containing protein 1.
   
  
 0.485
FAM8A1
Protein FAM8A1.
      
 0.473
TMEM43
Transmembrane protein 43 isoform X2.
      
 0.473
ZBTB2
Zinc finger and BTB domain-containing protein 2.
    
 
 0.440
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.