STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIN1Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1. (142 aa)    
Predicted Functional Partners:
GALE
UDP-galactose-4-epimerase.
 
  
 0.737
SSU72
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
   
 
 0.727
HIPK2
Homeodomain-interacting protein kinase 2 isoform X1.
    
 0.676
RANBP2
RAN binding protein 2.
   
 0.664
PPIF
Peptidyl-prolyl cis-trans isomerase F, mitochondrial.
   
 0.662
PPIA
Peptidyl-prolyl cis-trans isomerase A (cyclophilin A).
   
 0.662
SAMM50
Sorting and assembly machinery component 50 homolog.
  
 
 0.632
TMEM123
Transmembrane protein 123.
   
 0.614
ENSSCAP00000019071
annotation not available
   
 0.614
PIP4K2B
Phosphatidylinositol 5-phosphate 4-kinase type-2 beta.
    
 0.607
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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