STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DET1De-etiolated-1. (551 aa)    
Predicted Functional Partners:
COP1
E3 ubiquitin-protein ligase COP1 isoform X1.
    
 0.996
DDB1
DNA damage-binding protein 1.
    
 0.987
DDB2
DNA damage-binding protein 2.
     
 0.986
ERCC8
DNA excision repair protein ERCC-8.
     
  0.979
CUL4A
Cullin-4A isoform X1.
    
 0.961
CUL4B
Cullin-4B.
    
 0.961
DDA1
DET1- and DDB1-associated protein 1.
    
 0.934
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.931
DCAF5
DDB1- and CUL4-associated factor 5 isoform X1.
     
 0.868
DTL
Denticleless protein homolog.
     
 0.844
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.