STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL4639S ribosomal protein L46, mitochondrial. (157 aa)    
Predicted Functional Partners:
MRPL55
39S ribosomal protein L55, mitochondrial isoform X1.
   
 0.947
MRPL47
39S ribosomal protein L47, mitochondrial.
   
 0.943
MRPL40
39S ribosomal protein L40, mitochondrial.
   
 
 0.931
NDUFAB1
NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein.
   
  0.930
MRPL2
39S ribosomal protein L2, mitochondrial.
   
 0.924
MRPL9
39S ribosomal protein L9, mitochondrial.
   
 0.920
MRPL50
39S ribosomal protein L50, mitochondrial isoform X1.
   
 0.916
MRPL16
39S ribosomal protein L16, mitochondrial.
   
 0.916
MRPL48
39S ribosomal protein L48, mitochondrial.
   
 
 0.916
MRPL41
39S ribosomal protein L41, mitochondrial.
   
 0.913
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.