STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNU13U4/U6 small nuclear ribonucleoprotein SNU13. (128 aa)    
Predicted Functional Partners:
ENSSCAP00000002922
annotation not available
   
 0.999
NOP58
Nucleolar protein 58 isoform X1.
   
 0.999
UTP15
U3 small nucleolar RNA-associated protein 15 homolog.
   
 0.999
BMS1
Ribosome biogenesis protein BMS1 homolog.
   
 0.998
UTP4
U3 small nucleolar RNA-associated protein 4 homolog.
   
 0.998
PRPF3
U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1.
   
 0.998
SNRNP200
LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein 200 kDa helicase.
    
 0.998
RRP9
U3 small nucleolar RNA-interacting protein 2.
   
 0.998
PRPF4
U4/U6 small nuclear ribonucleoprotein Prp4 isoform X2.
   
 0.997
MPHOSPH10
U3 small nucleolar ribonucleoprotein protein MPP10.
   
 0.997
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.