STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIOK2Serine/threonine-protein kinase RIO2 isoform X1. (548 aa)    
Predicted Functional Partners:
TSR1
Pre-rRNA-processing protein TSR1 homolog.
   
 0.999
NOB1
RNA-binding protein NOB1.
   
 0.999
LTV1
Protein LTV1 homolog.
   
 0.999
RPS3
Small subunit ribosomal protein S3e.
    
 0.998
BYSL
Bystin like.
   
 0.998
RPS2
Small subunit ribosomal protein S2e.
    
 0.998
LOC103825821
Small subunit ribosomal protein S20e.
   
 0.996
RPS13
Small subunit ribosomal protein S13e.
    
 0.994
RPS15
Small subunit ribosomal protein S15e.
    
 0.994
RPS5
Small subunit ribosomal protein S5e.
    
 0.994
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.