Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
P4HTMHypoxia-inducible factor prolyl 4-hydroxylase. (454 aa)    
Predicted Functional Partners:
NT5DC1
5'-nucleotidase domain-containing protein 1.
      
 0.703
CCDC152
Coiled-coil domain containing 152.
      
 0.695
CYTH4
Cytohesin-4.
      
 0.678
OSBPL8
Oxysterol-binding protein-related protein 8 isoform X1.
      
 0.672
DPY19L1
Dpy-19 like C-mannosyltransferase 1.
      
 0.613
METRN
Meteorin, glial cell differentiation regulator.
      
 0.596
CLIC2
Chloride intracellular channel protein 2.
      
 0.545
CPQ
Carboxypeptidase Q isoform X2.
      
 0.528
IFT22
Intraflagellar transport protein 22 homolog.
      
 0.527
CCDC170
Coiled-coil domain containing 170.
    
 
 0.526
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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