STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103813616Tumor necrosis factor receptor superfamily member 13C-like. (216 aa)    
Predicted Functional Partners:
TNFSF13B
Tumor necrosis factor ligand superfamily member 13B.
    
 0.980
TRAF3
TNF receptor-associated factor 3 isoform X1.
   
 0.953
TRAF5
TNF receptor-associated factor 5 isoform X1.
   
 0.797
CD40LG
Tumor necrosis factor ligand superfamily member 5.
     
 0.772
TNFRSF13B
Tumor necrosis factor receptor superfamily member 13B.
   
  
 0.694
MAP3K14
Mitogen-activated protein kinase kinase kinase 14 isoform X1.
   
 
 0.683
TRAF1
TNF receptor-associated factor 1 isoform X2.
   
 0.669
TRAF2
TNF receptor-associated factor 2 isoform X1.
   
 0.669
ENSSCAP00000005649
annotation not available
   
 
 0.632
ENSSCAP00000005681
annotation not available
   
 
 0.632
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.