Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPS6KC1Ribosomal protein S6 kinase delta-1 isoform X1. (1081 aa)    
Predicted Functional Partners:
USE1
Unconventional SNARE in the endoplasmic reticulum protein 1.
    
 0.784
RINT1
RAD50-interacting protein 1.
   
 0.774
STX18
LOW QUALITY PROTEIN: syntaxin-18.
    
 0.767
NBAS
Neuroblastoma-amplified sequence.
   
 0.759
ZW10
Centromere/kinetochore protein zw10 homolog.
   
 0.754
LYPD6B
Ly6/PLAUR domain-containing protein 6B isoform X1.
   
 
 0.743
TATDN3
Putative deoxyribonuclease TATDN3 isoform X1.
      
 0.702
ADAP1
Arf-GAP with dual PH domain-containing protein 1 isoform X1.
      
 0.693
BEND7
BEN domain-containing protein 7 isoform X1.
      
 0.692
OTOL1
LOW QUALITY PROTEIN: otolin-1.
      
 0.684
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.