STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTFOvotransferrin. (704 aa)    
Predicted Functional Partners:
TFRC
Transferrin receptor protein 1.
  
 0.979
LOC103817346
Ovomucoid-like.
      
 0.894
LOC103818828
Ovalbumin-like.
   
 
 0.893
LYZ
Lysozyme C.
   
 0.881
LOC103817344
Ovoinhibitor-like.
      
 0.785
LOC103817347
Ovoinhibitor-like isoform X1.
      
 0.783
RARRES1
Retinoic acid receptor responder protein 1.
      
 0.742
KRT19
Keratin, type I cytoskeletal 19.
   
  
 0.701
ALB
Serum albumin.
   
  
 0.668
ACTC1
Actin, alpha cardiac muscle 1.
      
 0.646
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.