STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPB41L4BBand 4.1-like protein 4B. (425 aa)    
Predicted Functional Partners:
CASK
Peripheral plasma membrane protein CASK isoform X10.
   
 0.937
PRKCI
Protein kinase C iota type isoform X1.
    
 0.914
PRKCZ
Protein kinase C zeta type isoform X1.
    
 0.914
ARHGEF18
Rho guanine nucleotide exchange factor 18 isoform X2.
     
 0.909
PTPN20
Protein tyrosine phosphatase non-receptor type 20.
 
      0.598
FRRS1L
DOMON domain-containing protein FRRS1L.
      
 0.514
MPP1
MAGUK 55 kDa erythrocyte membrane protein.
    
 0.455
RSPO4
R-spondin 4.
      
 0.414
MPP6
MAGUK p55 subfamily member 6 isoform X1.
    
 0.402
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.