Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KLHL30Kelch-like protein 30 isoform X1. (590 aa)    
Predicted Functional Partners:
PRPF40A
Pre-mRNA-processing factor 40 homolog A.
     
 0.688
NIF3L1
NIF3-like protein 1.
   
  
 0.684
WDR33
Pre-mRNA 3' end processing protein WDR33 isoform X1.
     
 0.621
NANP
N-acetylneuraminic acid phosphatase.
   
 
 0.608
KLHL29
Kelch like family member 29.
    
 
 0.545
DIPK1C
Divergent protein kinase domain 1C.
      
 0.528
METTL8
Methyltransferase-like protein 8 isoform X1.
      
 0.528
UBXN7
UBX domain-containing protein 7.
    
  0.497
UGGT1
UDP-glucose:glycoprotein glucosyltransferase 1 isoform X1.
      
 0.493
PTPRN
Receptor-type tyrosine-protein phosphatase-like N isoform X1.
      
 0.432
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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