STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR18Pre-rRNA-processing protein IPI3. (486 aa)    
Predicted Functional Partners:
TEX10
Testis-expressed protein 10 homolog isoform X2.
   
 0.998
NOL9
Nucleolar protein 9.
   
 0.993
LAS1L
Ribosomal biogenesis protein LAS1L.
   
 0.991
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.987
PA2G4
Proliferation-associated protein 2G4.
  
 
 0.974
GNL3
G protein nucleolar 3.
   
 0.970
GNL2
Nucleolar GTP-binding protein 2.
   
 0.967
BOP1
BOP1 ribosomal biogenesis factor.
   
 0.960
NLE1
Notchless protein homolog 1.
  
 0.958
WDR12
Ribosome biogenesis protein WDR12.
  
 
 0.950
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.