STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FLVCR1MFS transporter, FLVCR family, feline leukemia virus subgroup C receptor-related protein. (525 aa)    
Predicted Functional Partners:
DRAM1
DNA damage-regulated autophagy modulator protein 1.
      
 0.595
ABCB10
ATP-binding cassette sub-family B member 10, mitochondrial.
   
  
 0.582
MEST
Mesoderm-specific transcript homolog protein isoform X1.
   
  
 0.541
STEAP3
Metalloreductase STEAP3 isoform X1.
      
 0.534
LRAT
Phosphatidylcholine-retinol O-acyltransferase.
      
 0.528
ZNF532
Zinc finger protein 532 isoform X1.
      
 0.469
NEUROG3
Neurogenin 3.
      
 0.446
DRAM2
DNA damage-regulated autophagy modulator protein 2.
      
 0.443
IMP4
U3 small nucleolar ribonucleoprotein protein IMP4.
      
 0.441
DHX40
LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DHX40.
   
  
 0.435
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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