STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD13AAnkyrin repeat domain-containing protein 13A isoform X1. (587 aa)    
Predicted Functional Partners:
TMEM25
Transmembrane protein 25.
      
 0.565
C12orf43
Protein CUSTOS.
      
 0.536
UBA52
Ubiquitin-large subunit ribosomal protein L40e.
    
   0.517
MYO9B
Myosin IXB.
     
 0.509
MYO9A
Unconventional myosin-IXa isoform X1.
     
 0.509
MMAB
Cob(I)alamin adenosyltransferase.
      
 0.482
SYNDIG1L
Synapse differentiation-inducing gene protein 1-like.
      
 0.461
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.