STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAGOHProtein mago nashi homolog. (155 aa)    
Predicted Functional Partners:
ENSSCAP00000012048
annotation not available
   
 0.999
EIF4A3
Eukaryotic initiation factor 4A-III.
   
 0.998
CASC3
CASC3 exon junction complex subunit.
    
 0.994
UPF3A
Regulator of nonsense transcripts 3A.
    
 0.988
UPF3B
Regulator of nonsense transcripts 3B.
    
 0.988
RANBP2
RAN binding protein 2.
   
  0.944
ALYREF
LOW QUALITY PROTEIN: THO complex subunit 4.
   
 0.944
CWC22
Pre-mRNA-splicing factor CWC22 homolog.
    
 0.938
UPF2
Regulator of nonsense transcripts 2.
     
 0.931
SNRPE
Small nuclear ribonucleoprotein E.
   
  0.930
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.