Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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Textmining
[Homology]
Score
RRP7ARibosomal RNA processing 7 homolog A. (319 aa)    
Predicted Functional Partners:
NOL6
Nucleolar protein 6.
   
 0.999
UTP4
U3 small nucleolar RNA-associated protein 4 homolog.
   
 0.983
TBL3
U3 small nucleolar RNA-associated protein 13.
   
 0.982
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
   
 0.982
UTP18
U3 small nucleolar RNA-associated protein 18 homolog.
   
 0.982
HEATR1
U3 small nucleolar RNA-associated protein 10.
   
 0.980
WDR36
LOW QUALITY PROTEIN: WD repeat-containing protein 36.
   
 0.980
BMS1
Ribosome biogenesis protein BMS1 homolog.
   
 0.978
UTP20
Small subunit processome component 20 homolog.
   
 0.978
PWP2
Periodic tryptophan protein 2 homolog.
   
 0.978
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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