STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTLDenticleless protein homolog. (688 aa)    
Predicted Functional Partners:
DDB1
DNA damage-binding protein 1.
    
 0.996
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.977
PCNA
Proliferating cell nuclear antigen.
   
 0.958
CDC6
Cell division cycle 6.
   
  
 0.940
WDHD1
WD repeat and HMG-box DNA-binding protein 1.
   
  
 0.938
CDT1
Chromatin licensing and DNA replication factor 1.
   
 
 0.927
ERCC8
DNA excision repair protein ERCC-8.
  
  
 0.924
DCAF1
DDB1- and CUL4-associated factor 1.
     
 0.923
CUL4A
Cullin-4A isoform X1.
    
 0.913
CUL4B
Cullin-4B.
    
 0.913
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.