Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RHOJRho-related GTP-binding protein RhoJ. (215 aa)    
Predicted Functional Partners:
ITSN2
Intersectin-2 isoform X1.
    
 0.840
PAK2
Serine/threonine-protein kinase PAK 2.
    
 0.786
DOCK8
Dedicator of cytokinesis protein 8 isoform X1.
   
 0.752
ITSN1
Intersectin-1 isoform X1.
    
 0.744
GOPC
Golgi-associated PDZ and coiled-coil motif-containing protein isoform X1.
    
 0.723
CDC42BPA
Serine/threonine-protein kinase MRCK alpha isoform X1.
   
 0.707
PAK6
Serine/threonine-protein kinase PAK 6 isoform X3.
    
 0.683
CDC42EP4
Cdc42 effector protein 4.
    
 0.683
ZAP70
Tyrosine-protein kinase ZAP-70 isoform X1.
   
 0.669
PREX2
Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2 protein.
    
 0.663
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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