STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RD3Protein RD3 isoform X2. (210 aa)    
Predicted Functional Partners:
SUCO
SUN domain-containing ossification factor isoform X1.
      
 0.659
SPATA7
Spermatogenesis-associated protein 7 isoform X1.
      
 0.540
LCA5
Lebercilin.
      
 0.521
ENSSCAP00000000584
annotation not available
    
 
 0.497
PDE6B
Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta.
    
 
 0.486
NEK2
NIMA (never in mitosis gene a)-related kinase 2.
      
 0.474
FGF5
Fibroblast growth factor 5.
      
 0.472
CEP290
Centrosomal protein 290.
      
 0.465
LRAT
Phosphatidylcholine-retinol O-acyltransferase.
      
 0.465
IQCB1
IQ calmodulin-binding motif-containing protein 1 isoform X1.
      
 0.453
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.