STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000007880annotation not available (366 aa)    
Predicted Functional Partners:
CX3CR1
CX3C chemokine receptor 1.
    
 0.912
CXCR4
C-X-C chemokine receptor type 4.
    
 0.806
LOC108964818
C-C chemokine receptor type 5-like.
    
 0.791
LOC103812987
C-C chemokine receptor type 8-like.
  
 
 0.768
CXCL12
Stromal cell-derived factor 1 isoform X1.
   
 0.742
LOC103813169
C-C chemokine receptor type 8-like.
    
 0.699
LOC103820036
C-C motif chemokine 5-like isoform X1.
   
 0.695
CXCR2
C-X-C chemokine receptor type 2.
    
 0.694
LOC103822904
C-C motif chemokine 4-like.
   
 0.649
EGF
Pro-epidermal growth factor isoform X1.
     
 0.616
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.