Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ZNF598E3 ubiquitin-protein ligase ZNF598 isoform X1. (817 aa)    
Predicted Functional Partners:
ASCC3
Activating signal cointegrator 1 complex subunit 3 isoform X1.
    
 0.930
RPS3
Small subunit ribosomal protein S3e.
    
 
 0.896
LOC103825821
Small subunit ribosomal protein S20e.
    
 
 0.892
RPS10
Small subunit ribosomal protein S10e.
    
 
 0.865
EIF4E2
Eukaryotic translation initiation factor 4E type 2 isoform X1.
    
 
 0.840
HBS1L
Elongation factor 1 alpha-like protein.
    
 
 0.837
TRIP4
Activating signal cointegrator 1.
    
 0.776
ASCC2
Activating signal cointegrator 1 complex subunit 2.
    
 0.772
LTN1
E3 ubiquitin-protein ligase listerin.
    
 
 0.760
MKRN2
Probable E3 ubiquitin-protein ligase makorin-2.
      
 0.728
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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