STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTX2Probable E3 ubiquitin-protein ligase DTX2 isoform X1. (604 aa)    
Predicted Functional Partners:
NOTCH1
Neurogenic locus notch homolog protein 1 isoform X1.
    
 0.923
DTX3L
E3 ubiquitin-protein ligase DTX3L.
  
 
 
0.909
NOTCH2
Neurogenic locus notch homolog protein 2.
     
 0.901
ITCH
E3 ubiquitin-protein ligase Itchy homolog.
     
 0.571
DIXDC1
LOW QUALITY PROTEIN: dixin.
      
 0.493
TBK1
Serine/threonine-protein kinase TBK1 isoform X1.
    
 0.458
IKBKE
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.458
UBA52
Ubiquitin-large subunit ribosomal protein L40e.
     
  0.435
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
     
  0.435
RNF7
RING-box protein 2 isoform X1.
      
 0.431
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.