STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAF13DDB1- and CUL4-associated factor 13. (445 aa)    
Predicted Functional Partners:
UTP14A
U3 small nucleolar RNA-associated protein 14 homolog A isoform X1.
   
 0.997
NOC4L
U3 small nucleolar RNA-associated protein 19.
   
 0.995
UTP20
Small subunit processome component 20 homolog.
   
 0.993
UTP11
UTP11 small subunit processome component.
   
 0.993
NOP14
Nucleolar protein 14.
   
 0.992
EMG1
RRNA small subunit pseudouridine methyltransferase Nep1.
   
 0.990
PDCD11
Programmed cell death 11.
   
 0.990
FCF1
U3 small nucleolar RNA-associated protein 24.
   
 0.989
DDX52
Probable ATP-dependent RNA helicase DDX52.
   
 0.989
KRR1
KRR1 small subunit processome component homolog isoform X1.
   
 0.987
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.