STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCGF2Polycomb group ring finger 2. (318 aa)    
Predicted Functional Partners:
RNF2
E3 ubiquitin-protein ligase RNF1/2.
   
0.949
CBX8
Chromobox protein homolog 8.
    
 0.920
KDM2A
LOW QUALITY PROTEIN: lysine-specific demethylase 2A.
   
 0.894
KDM2B
F-box and leucine-rich repeat protein 10/11.
   
 0.894
CBX4
LOW QUALITY PROTEIN: E3 SUMO-protein ligase CBX4.
    
 0.856
CBX7
LOW QUALITY PROTEIN: chromobox protein homolog 7.
    
 0.811
CBX2
Chromobox 2.
    
 0.791
SCML2
Scm polycomb group protein like 2.
    
 0.771
SCMH1
Polycomb protein SCMH1 isoform X1.
    
 0.771
CBX6
Chromobox protein homolog 6.
    
 0.735
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.