Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
CWC25Pre-mRNA-splicing factor CWC25 homolog isoform X1. (313 aa)    
Predicted Functional Partners:
DHX38
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16.
    
 0.994
CDC40
Pre-mRNA-processing factor 17.
    
 0.991
CWC22
Pre-mRNA-splicing factor CWC22 homolog.
   
 0.986
PPIL1
Peptidyl-prolyl cis-trans isomerase-like 1.
   
 0.965
PPWD1
LOW QUALITY PROTEIN: peptidylprolyl isomerase domain and WD repeat-containing protein 1.
    
 0.965
ENSSCAP00000010944
annotation not available
    
  0.960
DHX35
Probable ATP-dependent RNA helicase DHX35 isoform X2.
   
 0.960
ENSSCAP00000017292
annotation not available
   
 0.950
LOC103824744
Splicing factor YJU2-like.
   
 0.950
SYF2
Pre-mRNA-splicing factor SYF2.
   
 0.949
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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