Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSCAP00000008034annotation not available (201 aa)    
Predicted Functional Partners:
BDP1
Transcription factor TFIIIB component B'' homolog isoform X1.
    
 0.965
ENSSCAP00000008054
annotation not available
 
   
  0.952
GTF3C3
General transcription factor 3C polypeptide 3 (transcription factor C subunit 4).
    
 0.940
GTF3C1
LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 1.
   
 
 0.900
BRF1
Transcription factor IIIB 90 kDa subunit.
 
      0.892
GTF3C5
General transcription factor 3C polypeptide 5 (transcription factor C subunit 1).
    
 0.876
BRF2
Transcription factor IIIB 50 kDa subunit.
    
 0.871
GTF3C4
General transcription factor 3C polypeptide 4.
     
 0.862
TBPL2
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.857
TBP
Transcription initiation factor TFIID TATA-box-binding protein.
   
 0.857
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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