STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLIS1Zinc finger protein GLIS1 isoform X1. (896 aa)    
Predicted Functional Partners:
HHEX
Hematopoietically-expressed homeobox protein HHEX.
    
 
 0.891
SUFU
SUFU negative regulator of hedgehog signaling.
    
 0.874
OTX2
Homeobox protein OTX2 isoform X1.
    
 
 0.775
SMO
Smoothened, frizzled class receptor.
    
 0.774
SPOP
Speckle-type POZ protein isoform X1.
   
 0.754
SPOPL
Speckle-type POZ protein-like.
   
 0.754
STK36
Serine/threonine kinase 36.
    
 0.710
TNKS2
Poly [ADP-ribose] polymerase tankyrase-2.
    
 0.696
CSNK1A1
Casein kinase I isoform X1.
    
 0.663
GSK3B
Glycogen synthase kinase-3 beta isoform X1.
   
 0.654
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.