STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCTD6BTB/POZ domain-containing protein KCTD6. (237 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
    
 0.883
CIT
Citron Rho-interacting kinase isoform X1.
      
 0.682
ENSSCAP00000011166
annotation not available
      
 0.681
FBXO45
LOW QUALITY PROTEIN: F-box/SPRY domain-containing protein 1.
     
 0.663
UBE2F
Ubiquitin-conjugating enzyme E2 F.
    
  0.613
BTBD6
BTB/POZ domain-containing protein 6 isoform X1.
    
 0.591
NAE1
NEDD8 activating enzyme E1 subunit 1.
     
 0.573
KBTBD13
Kelch repeat and BTB domain-containing protein 13.
     
 0.499
KLHL11
Kelch-like protein 11.
     
 0.494
KLHL22
Kelch-like protein 22.
    
 0.493
Your Current Organism:
Serinus canaria
NCBI taxonomy Id: 9135
Other names: Atlantic canary, Canario raza, Common canary, S. canaria, Serinus canarius, canary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.